PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1BG064140.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 178aa MW: 19808.8 Da PI: 10.9677

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG064140.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.4	2.6e-16	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W++eEde+l +v+ G g +W + +++ g++R++k+c++rw++yl TRIDC1BG064140.2 14 RGPWSPEEDEQLRAYVRANGFGgNWIALPHKAGLNRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	36.2	1.4e-11	71	111	4	46
S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 T++Ed + + + G++ W+ Ia++++ gRt++++k++w++ TRIDC1BG064140.2 71 YTEQEDRVICSLYASIGSR-WSIIASKLP-GRTDNDVKNYWNT 111 69***************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 178 aa Download sequence
MGRAPCCDKA RVKRGPWSPE EDEQLRAYVR ANGFGGNWIA LPHKAGLNRC GKSCRLRWLN 60 YLRPDIRHGG YTEQEDRVIC SLYASIGSRW SIIASKLPGR TDNDVKNYWN TKLKKKAMPM 120 RVLPGPGANA CRPPCRPRRS RRRRPAPPPS TPAHQAATCA SPPPACTSRS TPCRGSCT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	9e-69	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG064140.2