PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG061600.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 256aa MW: 28337.7 Da PI: 6.7806 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 49.3 | 1.1e-15 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+ + ++G g+W++++r g++R++k+c++rw++yl TRIDC1BG061600.2 18 KGLWSPEEDEKLYGHIIRYGVGCWSSVPRLAGLHRCGKSCRLRWLNYL 65 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 52.7 | 1e-16 | 71 | 114 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +++eE++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC1BG061600.2 71 RGTFSQEEEDHIVALHQILGNR-WSHIASHLP-GRTDNEIKNFWNS 114 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MGRPTSGGVQ QQQPKLRKGL WSPEEDEKLY GHIIRYGVGC WSSVPRLAGL HRCGKSCRLR 60 WLNYLRPDLK RGTFSQEEED HIVALHQILG NRWSHIASHL PGRTDNEIKN FWNSCIKKKL 120 RQQGIDPATH KPMGATATAA LPDAKEEDRK TLSAAVNGSL APKQQTVFAP FPVCADYGGG 180 FAEDLSAGDA GFGAGDYSCV LDVSENLGYR ESSSNTNNWN YGGSVLDGEV LHWAKAEMEQ 240 QHDEPLEQKF SLPCTE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 3e-69 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG061600.2 |