PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG061590.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 331aa MW: 36682.1 Da PI: 6.3461

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG061590.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	48.8	1.7e-15	18	65	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+ + ++G g+W++++r g++R++k+c++rw++yl TRIDC1BG061590.2 18 KGLWSPEEDEKLYGHIIRYGVGCWSSVPRLAGLHRCGKSCRLRWLNYL 65 678*******************************************97 PP
2	Myb_DNA-binding	44.3	4.1e-14	71	152	1	46
TSSS-HHHHHHHHHHHHHTTTT.....................................-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.....................................tWktIartmgkgRtlkqcksrwqk 46 rg +++eE++ +v +++ lG++ +W+ Ia++++ gRt++++k++w++ TRIDC1BG061590.2 71 RGTFSQEEEDHIVALHQILGNRsvrprnaftsyyfrtaeigrvsgkiwdsilmrvvcacRWSQIASHLP-GRTDNEIKNFWNS 152 899****************************************************************.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 331 aa Download sequence
MGRPTSGGVQ QQQPKLRKGL WSPEEDEKLY GHIIRYGVGC WSSVPRLAGL HRCGKSCRLR 60 WLNYLRPDLK RGTFSQEEED HIVALHQILG NRSVRPRNAF TSYYFRTAEI GRVSGKIWDS 120 ILMRVVCACR WSQIASHLPG RTDNEIKNFW NSCIKKKLRQ QGIDPATHKP MASGAATTAL 180 PDVEVEDRKP LAAGADGSLA LKQSAEFDPF PVCADYGGGF SGELGAANAA ALYVQFGHCK 240 DGADEDAGFG AADYSCVLDV SENLGYGESS SNSSNWNYGS EVGSVLDGEV LHWGKAEMER 300 QHDEPLEHKF SLPCQEQSLL ANFEFNLEQY F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	5e-62	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG061590.2