PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG061550.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | MYB | ||||||||
Protein Properties | Length: 291aa MW: 32169.8 Da PI: 6.0408 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 54.2 | 3.3e-17 | 18 | 65 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l++ + ++G g+W++++r g++R++k+c++rw +yl TRIDC1BG061550.3 18 KGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAGLNRCAKSCRLRWINYL 65 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.6 | 8.8e-16 | 71 | 114 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++ +v +++ lG++ W+ Ia++++ gRt++++k++w++ TRIDC1BG061550.3 71 RGCFSQQEEDHIVALHQILGNR-WSQIASHLP-GRTDNEIKNFWNS 114 899*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 291 aa Download sequence |
QQNGTSIVRR RGQPKLRKGL WSPEEDEKLY NHIIRHGVGC WSSVPRLAGL NRCAKSCRLR 60 WINYLRPDLK RGCFSQQEED HIVALHQILG NRWSQIASHL PGRTDNEIKN FWNSCIKKKL 120 RQQGIDPATH KPLAAADTAT SALPDMEKED HKPLAAAAGS SLATKQPSVF DPFPVCVDYG 180 AGFADGLGAA NAAGFGAADY SCVLDVPENL GYGESSSNSS NRNYSGEVGS MLDGEAGSVL 240 DGEVLHWVKA EPAFAEMERQ HDVLLEYDFS LPCQEQSLLA NFEFNLEQYF X |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G26660.1 | 4e-70 | MYB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG061550.3 |