PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG061380.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 127aa    MW: 14439.3 Da    PI: 5.6068
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG061380.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB1291.6e-40501241993
             NF-YB  19 kvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrel 93 
                       + l  ++ki+kdaketvqecv efisf+tseas+kcqrek ktingddllwa+atlGfe+y+eplkvyl+kyre 
  TRIDC1BG061380.3  50 QELAVDGKIAKDAKETVQECVYEFISFITSEASEKCQREKSKTINGDDLLWAMATLGFEEYIEPLKVYLQKYREW 124
                       678899*******************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 127 aa     Download sequence    
PATQVRPSTP FPPPHSPPSL THLVFSPSQI QDAILAQALG HHGRSDRAQQ ELAVDGKIAK  60
DAKETVQECV YEFISFITSE ASEKCQREKS KTINGDDLLW AMATLGFEEY IEPLKVYLQK  120
YREWQYY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.11e-42NF-YB family protein