PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG061010.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 514aa MW: 60068.8 Da PI: 9.8453

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG061010.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63	8.3e-20	19	104	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY++YAk+ GF v ++++++ ++ + + t+ C+++gk++ ++k+ + +++++tr++C ak++ +++ ++k+++t++ l+HnH+++p TRIDC1BG061010.3 19 NFYKDYAKKEGFGVIRRTTRHG-EDSKLVYFTLACNRQGKAQYSSKN---SFKPNPSTRMQCPAKINFSRR-EEKFCITSITLDHNHPISP 104 6*************999998.6666999*********9999...999**************.9************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 514 aa Download sequence
MMLQPKKGMT FDSEDAVVNF YKDYAKKEGF GVIRRTTRHG EDSKLVYFTL ACNRQGKAQY 60 SSKNSFKPNP STRMQCPAKI NFSRREEKFC ITSITLDHNH PISPSKARFL RCHKKLDLHA 120 KRRLELNDQA GIRLNKKFGS LVMEAGGYVN LEFGEKECRN YLQETRRLKL GAGDAHAVYQ 180 YFLRMHEKNR WVPAYVKDTF WAGMSSTKRS ESVNAFFDGY VHARTTLKQF VEQYENALRD 240 KVEKETKADS KSFQEEIPCI THFDFEKQFQ AAYTNAKFQE FQEQLRGKIY CYPSLQNNEG 300 PLLTFRVRED RKIFFEGEDG SIKEKWIISD FTVLFKQEEC DVRCICRLFE FRGILCSHII 360 TVLALMGIKD VPSRYILQRW RNDFKRKHVF IKCSYDDMLN TPVVQRYDEL CKRSHEVAEK 420 GAEPDELRDL VMDGLDQLER KVDAYRASHA VQVQAENPTS KHEDTMLNKE KLVLSPIPVR 480 SAGRPRSKRK ISKVDQVIQK LRAKKRQVPT STTK

Sequence ? help Back to Top

Protein Sequence Length: 514 aa Download sequence

MMLQPKKGMT FDSEDAVVNF YKDYAKKEGF GVIRRTTRHG EDSKLVYFTL ACNRQGKAQY  60
SSKNSFKPNP STRMQCPAKI NFSRREEKFC ITSITLDHNH PISPSKARFL RCHKKLDLHA  120
KRRLELNDQA GIRLNKKFGS LVMEAGGYVN LEFGEKECRN YLQETRRLKL GAGDAHAVYQ  180
YFLRMHEKNR WVPAYVKDTF WAGMSSTKRS ESVNAFFDGY VHARTTLKQF VEQYENALRD  240
KVEKETKADS KSFQEEIPCI THFDFEKQFQ AAYTNAKFQE FQEQLRGKIY CYPSLQNNEG  300
PLLTFRVRED RKIFFEGEDG SIKEKWIISD FTVLFKQEEC DVRCICRLFE FRGILCSHII  360
TVLALMGIKD VPSRYILQRW RNDFKRKHVF IKCSYDDMLN TPVVQRYDEL CKRSHEVAEK  420
GAEPDELRDL VMDGLDQLER KVDAYRASHA VQVQAENPTS KHEDTMLNKE KLVLSPIPVR  480
SAGRPRSKRK ISKVDQVIQK LRAKKRQVPT STTK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	484	494	RPRSKRKISKV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G22170.2	3e-46	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG061010.3