PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG058040.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 263aa    MW: 28505.9 Da    PI: 5.9427
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG058040.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.87.9e-08107132326
                       S---SGGGGTS...--TTTTT-SS-SS CS
           zf-CCCH   3 telCrffartG...tCkyGdrCkFaHg 26 
                        e+C++f+r      C++G++C+FaHg
  TRIDC1BG058040.2 107 GEPCPDFRR-RpgaACPRGSSCPFAHG 132
                       589****99.558*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
SHVHGHGLLL DPAALAYSWA AEPEIPPQLL AALGEYLSNS AAAGSHGDNQ SAVDTEADAE  60
ADDEFMMYEF KVRRCARARS HDWTACPYAH PGEAARRRDP RRVAYAGEPC PDFRRRPGAA  120
CPRGSSCPFA HGTFELWLHP SRYRTRPCRA GPACRRRVCF FAHAAGELRL ASHHKGPDSP  180
LALSPKSTLT ALWESPPVSP VEGRMRWLDG IDDAADAEVE EIMLAMQQLS FANAAAPSAP  240
SGTLPAVTED DGPDLGWVSE LVM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29190.15e-43C3H family protein