PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG057210.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 386aa    MW: 39825.2 Da    PI: 6.0003
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG057210.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.24.7e-18259293135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C +C t kTp+WR gp g+ktLCnaCG++y++ +l
  TRIDC1BG057210.1 259 CLHCETDKTPQWRTGPLGPKTLCNACGVRYKSGRL 293
                       99*****************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 386 aa     Download sequence    
AAECAGGGGG GGGALREVKK EAGAGDVFLV DDLLDLPCDD DEEEDDAAAA GFADGAADCS  60
AGEAGGGGGN ASADSSTVTA VDSCSNSLSG GLADGDFSGG LCEPYDQLAE LEWLSNYMGD  120
DNFPTEDLRK LQLISGIPSA SSQTAPRAPA APVQPCGGGG VGTALWRSEA HAGQVSVPGK  180
ARSKRSRVAP CNWSSRLLVL PPAPASPPSP ASAVISPSES GTAFPLFPNK KPAKSSKKEG  240
PAAPAMTAAE AAAAEGRRCL HCETDKTPQW RTGPLGPKTL CNACGVRYKS GRLVPEYRPA  300
ASPTFVPSKH SNSHRKVVEL RRQKDTPQQQ LLHHSQHQPP QQQHQLGPGL GFQVPSPLLF  360
DGPHLGGGAD EFLIRNRIGP DHRQLI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G25830.13e-61GATA family protein