PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1BG056900.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 743aa MW: 81399.4 Da PI: 4.151

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG056900.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	31.6	2.9e-10	258	298	12	52
HHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHH CS Homeobox 12 leeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrR 52 e+L+++F ++yps++ +e LA++lgLt qV WF R TRIDC1BG056900.9 258 NERLNQYFTTDQYPSRAVKESLAQELGLTFHQVNKWFESTR 298 589**********************************8766 PP

Sequence ? help Back to Top
Protein Sequence Length: 743 aa Download sequence
MQNDVADLPS DDSEDDDFDP NISEEHVAGH AEGSSEEDGD EGSDSDDSNF MTSSDNSEHV 60 KEKVKVDDLG LPSEDSEDDD YDPAGPDSDK DIEEKQDESD FTSDSDEFCA EITKSCSKDE 120 VSSGPKVGGR TNDLEGAPVR PNTSMSHSKD LEIDPDVILP STKRQVQRLD YKKLYDDTYG 180 EAPSESSDGD EWSGKSTLKE DNEERNEVDS FARKSSRGTR AVHPDGFHGL VNDQHAGGLT 240 SAGSNSKANK RHFGPVINER LNQYFTTDQY PSRAVKESLA QELGLTFHQV NKWFESTRHA 300 RAAAMKNGTQ LEKQSNSRKK KSSDATHMEV KDQPNACKEE GIRQHSPVKQ DTDGGQRTHV 360 PPESSQSYTK TSGLIGCPKS ESRENHEKNT SSKYVGMPTD GSAEDQILEL EPEDEGSDSD 420 DLNFVTRSGN SEPLKNREKI DDLGLPSAYS EDDDYDSDEV IEMMQSSSDE SNFTTSSDNP 480 EDVKEKVDDL GLPSEDSEDD DYDPAGPGSD EDIGKKQSSS EKSHSSDKSE NRKTKRKVDD 540 LGLPSEDSED DDYDPASPDS DKDIEEKQDE SDFSSDSDDF CVEIAKSCCG QEGVPSGAKV 600 GADRTDDLEG TTICANAAIS NLPSKDPEMD QYVVLPVSAR QKVQSPDSKK LAAYGRAPSD 660 SSYSEELSKK GTPEKDKGKE SEAGSFVRQS NEFTPQRSQQ SFHGSVNGQN AEELLTPNGS 720 STTGQKRQYG PIINQVLWFN RTG

Sequence ? help Back to Top

Protein Sequence Length: 743 aa Download sequence

MQNDVADLPS DDSEDDDFDP NISEEHVAGH AEGSSEEDGD EGSDSDDSNF MTSSDNSEHV  60
KEKVKVDDLG LPSEDSEDDD YDPAGPDSDK DIEEKQDESD FTSDSDEFCA EITKSCSKDE  120
VSSGPKVGGR TNDLEGAPVR PNTSMSHSKD LEIDPDVILP STKRQVQRLD YKKLYDDTYG  180
EAPSESSDGD EWSGKSTLKE DNEERNEVDS FARKSSRGTR AVHPDGFHGL VNDQHAGGLT  240
SAGSNSKANK RHFGPVINER LNQYFTTDQY PSRAVKESLA QELGLTFHQV NKWFESTRHA  300
RAAAMKNGTQ LEKQSNSRKK KSSDATHMEV KDQPNACKEE GIRQHSPVKQ DTDGGQRTHV  360
PPESSQSYTK TSGLIGCPKS ESRENHEKNT SSKYVGMPTD GSAEDQILEL EPEDEGSDSD  420
DLNFVTRSGN SEPLKNREKI DDLGLPSAYS EDDDYDSDEV IEMMQSSSDE SNFTTSSDNP  480
EDVKEKVDDL GLPSEDSEDD DYDPAGPGSD EDIGKKQSSS EKSHSSDKSE NRKTKRKVDD  540
LGLPSEDSED DDYDPASPDS DKDIEEKQDE SDFSSDSDDF CVEIAKSCCG QEGVPSGAKV  600
GADRTDDLEG TTICANAAIS NLPSKDPEMD QYVVLPVSAR QKVQSPDSKK LAAYGRAPSD  660
SSYSEELSKK GTPEKDKGKE SEAGSFVRQS NEFTPQRSQQ SFHGSVNGQN AEELLTPNGS  720
STTGQKRQYG PIINQVLWFN RTG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19510.1	1e-11	HB-PHD family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG056900.9