PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1BG055530.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 720aa MW: 82572.7 Da PI: 6.1635

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055530.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	36.1	2.1e-11	110	191	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y+++A GF + + + +k + C+++ k +++++ +++r+ ++++ +C+a+ +vk +g+we t++++eHnH+l+p TRIDC1BG055530.2 110 YYSAHALLSGFVAIRGPNFMR------KKFHVECNRSRKLAPSQDL-KRKREVYSVNKAQCEARAVVKPV-KGQWEYTSVRSEHNHPLCP 191 8999*****9999988777......456799*****9988.99999************99.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 720 aa Download sequence
MFFFICIQEQ PVIGADWSSG ALSDELVIHA NSADLSLQLA EEQSQLHDIM GINEMPINDI 60 GSASDSEGSS GNETDKEPGK YFYPGFEELV NPRPPEVGMR FPTLEDATRY YSAHALLSGF 120 VAIRGPNFMR KKFHVECNRS RKLAPSQDLK RKREVYSVNK AQCEARAVVK PVKGQWEYTS 180 VRSEHNHPLC PSPSLTKFFL SCKHMSAEEK SFLRALQQSS IHPKKAMKIF KRMRGILGSL 240 PFNTKDANTS QCAEQQGKPN SDVETTVKHL KELELQNPCV SITMQTDEDS IVRSLFWTDA 300 RSRLDYEIFG DVLSFDTTYS TISHNMLFTS ISGMNEHGRT LVFGYALLQD QKAETFKWMF 360 QTFLHVMGGK MPRAIITDQD EAIAKAISEV MPQVKHRFCK FHVMRKAREK LGGFIAARGN 420 INSELHALVN NSLTETEFEE GWAALIERYS ASENEYLQLL WETRKEWVPV YFREDFYPFV 480 ETTGCCEGAN SLFKDYVLPK DRIEKFLERY EDVQERIMET DDEDRLQSRT EPSCFSMQPI 540 EKHAARIYTR QIFLKVQREL LHSTAFNVQE IQTGTVYRLE KVSAYENPEF DRNSFELLVE 600 PSTNAIKCEC AKFTRDGIPC CHIFRLFTQF GVNEIPGQYI VPRWTAKFKE EQMKQYREKC 660 LDSPGIDQSE NTMRYAMLLS KVADIGKEIC GDGSKCDKFR LELDTIQGKT GNDGMRDTSN

Sequence ? help Back to Top

Protein Sequence Length: 720 aa Download sequence

MFFFICIQEQ PVIGADWSSG ALSDELVIHA NSADLSLQLA EEQSQLHDIM GINEMPINDI  60
GSASDSEGSS GNETDKEPGK YFYPGFEELV NPRPPEVGMR FPTLEDATRY YSAHALLSGF  120
VAIRGPNFMR KKFHVECNRS RKLAPSQDLK RKREVYSVNK AQCEARAVVK PVKGQWEYTS  180
VRSEHNHPLC PSPSLTKFFL SCKHMSAEEK SFLRALQQSS IHPKKAMKIF KRMRGILGSL  240
PFNTKDANTS QCAEQQGKPN SDVETTVKHL KELELQNPCV SITMQTDEDS IVRSLFWTDA  300
RSRLDYEIFG DVLSFDTTYS TISHNMLFTS ISGMNEHGRT LVFGYALLQD QKAETFKWMF  360
QTFLHVMGGK MPRAIITDQD EAIAKAISEV MPQVKHRFCK FHVMRKAREK LGGFIAARGN  420
INSELHALVN NSLTETEFEE GWAALIERYS ASENEYLQLL WETRKEWVPV YFREDFYPFV  480
ETTGCCEGAN SLFKDYVLPK DRIEKFLERY EDVQERIMET DDEDRLQSRT EPSCFSMQPI  540
EKHAARIYTR QIFLKVQREL LHSTAFNVQE IQTGTVYRLE KVSAYENPEF DRNSFELLVE  600
PSTNAIKCEC AKFTRDGIPC CHIFRLFTQF GVNEIPGQYI VPRWTAKFKE EQMKQYREKC  660
LDSPGIDQSE NTMRYAMLLS KVADIGKEIC GDGSKCDKFR LELDTIQGKT GNDGMRDTSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-82	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055530.2