PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055530.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 723aa MW: 82723.7 Da PI: 5.9754

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055530.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	36.1	2.1e-11	113	194	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +Y+++A GF + + + +k + C+++ k +++++ +++r+ ++++ +C+a+ +vk +g+we t++++eHnH+l+p TRIDC1BG055530.1 113 YYSAHALLSGFVAIRGPNFMR------KKFHVECNRSRKLAPSQDL-KRKREVYSVNKAQCEARAVVKPV-KGQWEYTSVRSEHNHPLCP 194 8999*****9999988777......456799*****9988.99999************99.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 723 aa Download sequence
MDGYAIISSD QEQPVIGADW SSGALSDELV IHANSADLSL QLAEEQSQLH DIMGINEMPI 60 NDIGSASDSE GSSGNETDKE PGKYFYPGFE ELVNPRPPEV GMRFPTLEDA TRYYSAHALL 120 SGFVAIRGPN FMRKKFHVEC NRSRKLAPSQ DLKRKREVYS VNKAQCEARA VVKPVKGQWE 180 YTSVRSEHNH PLCPSPSLTK FFLSCKHMSA EEKSFLRALQ QSSIHPKKAM KIFKRMRGIL 240 GSLPFNTKDA NTSQCAEQQG KPNSDVETTV KHLKELELQN PCVSITMQTD EDSIVRSLFW 300 TDARSRLDYE IFGDVLSFDT TYSTISHNML FTSISGMNEH GRTLVFGYAL LQDQKAETFK 360 WMFQTFLHVM GGKMPRAIIT DQDEAIAKAI SEVMPQVKHR FCKFHVMRKA REKLGGFIAA 420 RGNINSELHA LVNNSLTETE FEEGWAALIE RYSASENEYL QLLWETRKEW VPVYFREDFY 480 PFVETTGCCE GANSLFKDYV LPKDRIEKFL ERYEDVQERI METDDEDRLQ SRTEPSCFSM 540 QPIEKHAARI YTRQIFLKVQ RELLHSTAFN VQEIQTGTVY RLEKVSAYEN PEFDRNSFEL 600 LVEPSTNAIK CECAKFTRDG IPCCHIFRLF TQFGVNEIPG QYIVPRWTAK FKEEQMKQYR 660 EKCLDSPGID QSENTMRYAM LLSKVADIGK EICGDGSKCD KFRLELDTIQ GKTGNDGMRD 720 TSN

Sequence ? help Back to Top

Protein Sequence Length: 723 aa Download sequence

MDGYAIISSD QEQPVIGADW SSGALSDELV IHANSADLSL QLAEEQSQLH DIMGINEMPI  60
NDIGSASDSE GSSGNETDKE PGKYFYPGFE ELVNPRPPEV GMRFPTLEDA TRYYSAHALL  120
SGFVAIRGPN FMRKKFHVEC NRSRKLAPSQ DLKRKREVYS VNKAQCEARA VVKPVKGQWE  180
YTSVRSEHNH PLCPSPSLTK FFLSCKHMSA EEKSFLRALQ QSSIHPKKAM KIFKRMRGIL  240
GSLPFNTKDA NTSQCAEQQG KPNSDVETTV KHLKELELQN PCVSITMQTD EDSIVRSLFW  300
TDARSRLDYE IFGDVLSFDT TYSTISHNML FTSISGMNEH GRTLVFGYAL LQDQKAETFK  360
WMFQTFLHVM GGKMPRAIIT DQDEAIAKAI SEVMPQVKHR FCKFHVMRKA REKLGGFIAA  420
RGNINSELHA LVNNSLTETE FEEGWAALIE RYSASENEYL QLLWETRKEW VPVYFREDFY  480
PFVETTGCCE GANSLFKDYV LPKDRIEKFL ERYEDVQERI METDDEDRLQ SRTEPSCFSM  540
QPIEKHAARI YTRQIFLKVQ RELLHSTAFN VQEIQTGTVY RLEKVSAYEN PEFDRNSFEL  600
LVEPSTNAIK CECAKFTRDG IPCCHIFRLF TQFGVNEIPG QYIVPRWTAK FKEEQMKQYR  660
EKCLDSPGID QSENTMRYAM LLSKVADIGK EICGDGSKCD KFRLELDTIQ GKTGNDGMRD  720
TSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	3e-82	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055530.1