PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1BG055360.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 776aa MW: 88942.8 Da PI: 6.7636

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055360.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	50.6	6.4e-16	168	249	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF r+ +++k+ k ++ C+++gk +++++ +++r+ ++ +C+ak+ vk++ +++we t +++eHnH+l+p TRIDC1BG055360.2 168 RFYSTHAMLTGFAARRGTNYKR------RKFHLLCNRSGKLKPTQDL--QRKRKVNVLGSQCQAKVIVKLH-NEQWEFTGVKHEHNHPLCP 249 5******************9......5678*******9988..88888889999******9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 776 aa Download sequence
MQATDNFGEQ TSGPVPATNF EQVVMTYPDR ALEPSHSGAG LRMEKKHVGK QAIPEGGLQS 60 IGEINQGHAS NGIGTTVQGL LADMLHKQTN SVDPTVQQAE EQDQLHDVTE GHELCSNDTS 120 SGSDAGSSSG SELDTELGKC FYPSIEALEN SRPPEVGMKF PTLEDAERFY STHAMLTGFA 180 ARRGTNYKRR KFHLLCNRSG KLKPTQDLQR KRKVNVLGSQ CQAKVIVKLH NEQWEFTGVK 240 HEHNHPLCPS PSLTSFFLDH KYLSSEEKLF LRVLQQSRVN PRKAMNIFQR MRSNFGNVSS 300 SNEKDMSNSQ CVDQWRKENS DVETSLKRFK ELELRNLGFS YTMQKDEDNI VRTLFWTDAR 360 SKVDYEIFGD FIAFSTTYST NRHNMPFTPI IGVNNHGRIL VFGCALLQDQ KAETFKWMFQ 420 TFLHVMRGKL PKTIIIDQDE GMVKAIAEVM PQVRHRLCKF SVMRKAQEIL GAFMAARGNM 480 NAELHSLVDN SLTEKEFEEG WAVLIERYDA SENEYLRLMW KTRKNWVPVY FQADFYPFVE 540 SAEHGEGSNL LFKDNVLPKD RIEKFIEQYE RIQEGIVKTE EEDTLQSATE PAYFSMQPIE 600 KHAARIYTRQ IFLRVQKELY YSTALNAHEI QGGAAYRLEK VFDYENPEFD RNSFEVLVEP 660 GTHTFKCQCA KFTRDGILCC HIFRVFTQLG VIEIPAQYIV PRWAREFREE RLKEYEEKCS 720 KRTEDRKRCA MLLGKMADIG KGVCADSAKS GCFMLELDKV QEKLVGADDQ IVLWSK

Sequence ? help Back to Top

Protein Sequence Length: 776 aa Download sequence

MQATDNFGEQ TSGPVPATNF EQVVMTYPDR ALEPSHSGAG LRMEKKHVGK QAIPEGGLQS  60
IGEINQGHAS NGIGTTVQGL LADMLHKQTN SVDPTVQQAE EQDQLHDVTE GHELCSNDTS  120
SGSDAGSSSG SELDTELGKC FYPSIEALEN SRPPEVGMKF PTLEDAERFY STHAMLTGFA  180
ARRGTNYKRR KFHLLCNRSG KLKPTQDLQR KRKVNVLGSQ CQAKVIVKLH NEQWEFTGVK  240
HEHNHPLCPS PSLTSFFLDH KYLSSEEKLF LRVLQQSRVN PRKAMNIFQR MRSNFGNVSS  300
SNEKDMSNSQ CVDQWRKENS DVETSLKRFK ELELRNLGFS YTMQKDEDNI VRTLFWTDAR  360
SKVDYEIFGD FIAFSTTYST NRHNMPFTPI IGVNNHGRIL VFGCALLQDQ KAETFKWMFQ  420
TFLHVMRGKL PKTIIIDQDE GMVKAIAEVM PQVRHRLCKF SVMRKAQEIL GAFMAARGNM  480
NAELHSLVDN SLTEKEFEEG WAVLIERYDA SENEYLRLMW KTRKNWVPVY FQADFYPFVE  540
SAEHGEGSNL LFKDNVLPKD RIEKFIEQYE RIQEGIVKTE EEDTLQSATE PAYFSMQPIE  600
KHAARIYTRQ IFLRVQKELY YSTALNAHEI QGGAAYRLEK VFDYENPEFD RNSFEVLVEP  660
GTHTFKCQCA KFTRDGILCC HIFRVFTQLG VIEIPAQYIV PRWAREFREE RLKEYEEKCS  720
KRTEDRKRCA MLLGKMADIG KGVCADSAKS GCFMLELDKV QEKLVGADDQ IVLWSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G27110.2	6e-81	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055360.2