PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG055320.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 678aa MW: 78762.5 Da PI: 7.7972

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG055320.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	51.8	2.7e-16	74	155	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 +fY+++A +GF vr+ +++++ +k ++ C+++gk +++++ k++r+++ C+ak+ vk++ +++we + +++eHnH+l+p TRIDC1BG055320.3 74 RFYSTHAMLTGFAVRRGSNYRR------VKFDLECNRSGKLKPTEDL--KRKRRSNALGSRCQAKVIVKLH-NEQWEFIGVKHEHNHPLCP 155 5******************9......7889*******9988..555555566789*****9.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 678 aa Download sequence
MQRHAEEQDQ LHGVTQGHEM SSNDTSSGSD SGSSSGSELD TELGKCFYPS FEELENSRPP 60 EIGMRFPTLE DAERFYSTHA MLTGFAVRRG SNYRRVKFDL ECNRSGKLKP TEDLKRKRRS 120 NALGSRCQAK VIVKLHNEQW EFIGVKHEHN HPLCPSPSLA SFFLNHKYLS SEEKLFLRVL 180 QQSRVNPRKA MNIFRRMRSN FRKVSSIKEK VTSNSQCANQ WRKENSDVET ALKRFKELEL 240 RNLGFSYTMQ KDEDNIVRSL FWTDARSKVD YEIFGDFISF NTTYSTNRNN MPFTPIIGMN 300 SHGRILVFGC ALLQDQKAET FKWMFQTFLH VMGGKLPRIV ITDQDEGMAT AISEVMPQVR 360 HRFCKFSVMR KAQEMLGAFM AARSNMNAEL HGLVDNSVTE KEFEEGWDVL TERYDASQNE 420 YLRLMWETRK NWVPVYFQAD FCPFVESAGH CEVANLLFKD NVLPKDRIEK FIEQYERMQE 480 HIVKTEEEDA LQSATEPAYF SMQPIEKHAA RIYTRQIFLI AQNELYYSTA FNVHEIQGGY 540 RLEKVFNYEN PEFSRNSFEV LAEPGTHAFK CQCAKFTRDG ILCCHIFRVF TQLGVKEIPA 600 QYMLPRWAPK FIEDRLKEYE ERCSKRRENK TRYAMLLGKM ADIGKGICAD GAKSGCFMLE 660 LDKVQETLAT TAEEIPRK

Sequence ? help Back to Top

Protein Sequence Length: 678 aa Download sequence

MQRHAEEQDQ LHGVTQGHEM SSNDTSSGSD SGSSSGSELD TELGKCFYPS FEELENSRPP  60
EIGMRFPTLE DAERFYSTHA MLTGFAVRRG SNYRRVKFDL ECNRSGKLKP TEDLKRKRRS  120
NALGSRCQAK VIVKLHNEQW EFIGVKHEHN HPLCPSPSLA SFFLNHKYLS SEEKLFLRVL  180
QQSRVNPRKA MNIFRRMRSN FRKVSSIKEK VTSNSQCANQ WRKENSDVET ALKRFKELEL  240
RNLGFSYTMQ KDEDNIVRSL FWTDARSKVD YEIFGDFISF NTTYSTNRNN MPFTPIIGMN  300
SHGRILVFGC ALLQDQKAET FKWMFQTFLH VMGGKLPRIV ITDQDEGMAT AISEVMPQVR  360
HRFCKFSVMR KAQEMLGAFM AARSNMNAEL HGLVDNSVTE KEFEEGWDVL TERYDASQNE  420
YLRLMWETRK NWVPVYFQAD FCPFVESAGH CEVANLLFKD NVLPKDRIEK FIEQYERMQE  480
HIVKTEEEDA LQSATEPAYF SMQPIEKHAA RIYTRQIFLI AQNELYYSTA FNVHEIQGGY  540
RLEKVFNYEN PEFSRNSFEV LAEPGTHAFK CQCAKFTRDG ILCCHIFRVF TQLGVKEIPA  600
QYMLPRWAPK FIEDRLKEYE ERCSKRRENK TRYAMLLGKM ADIGKGICAD GAKSGCFMLE  660
LDKVQETLAT TAEEIPRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-74	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG055320.3