PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG053140.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 361aa    MW: 41368.5 Da    PI: 6.6024
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG053140.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding231.9e-07212254145
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       r +WT+ + +l++++ +q+G++ ++ I + ++  +++ q++ ++ 
  TRIDC1BG053140.3 212 RAKWTKSDTDLFYQGLRQFGSD-FAMIQQLFP-DKSRDQVRQKFK 254
                       569*******************.*********.********9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 361 aa     Download sequence    
MKLRSRTEIQ KVGLSEHIVD DHLDEDFVEP SATEQNNDSG DENTAGGKQK APRKSRKKDP  60
NKEPLRGSKR TSTKSTSEKS QPNQQKNKSE VSSRGRKRAL KDTMTEQPEK KLTHRIRQKR  120
AQEVQTLLQK PDHEIDRMKL SVTHLRLLQE ARERIQSKTP SGPSSSNQSS HFGDTDDFDP  180
FGDNYDNDRT ENHALENATK LNYHSYMDKK TRAKWTKSDT DLFYQGLRQF GSDFAMIQQL  240
FPDKSRDQVR QKFKSEDKKH PMQVHDAILH RSRDNLYLKQ VMKQLNIEDS LKDINSTQKQ  300
EVASTEGNTG NDVISETNIS VENVSNLSDE EMGTLQSEVK EGEDVAAGNA DDVDLDVFDW  360
Y
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G39160.11e-26MYB_related family protein