PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG051990.12

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 272aa MW: 30127 Da PI: 7.0258

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG051990.12	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	103.3	1.5e-32	45	99	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWt++LH+rFv+a++qLGG+++AtPk +l +m+v+g+t++hvkSHLQkYRl TRIDC1BG051990.12 45 KQRLRWTSDLHSRFVDAIAQLGGPDRATPKGVLTVMGVPGITIYHVKSHLQKYRL 99 79****************************************************8 PP
2	Myb_DNA-binding	51.6	2.1e-16	47	98	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT +++ ++vda++qlGg+ t+k + mg g t +++ks++qky+ TRIDC1BG051990.12 47 RLRWTSDLHSRFVDAIAQLGGPdraTPKGVLTVMGvPGITIYHVKSHLQKYR 98 89*************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 272 aa Download sequence
MMYHAKKFSV PFAPQRAQNS EHVSNIGAFS GSNISNPANP VGSGKQRLRW TSDLHSRFVD 60 AIAQLGGPDR ATPKGVLTVM GVPGITIYHV KSHLQKYRLA KYIPESPAEG SKDEKKDSSD 120 SFSNADSAPD ILHLSFRGSQ INEGLKMQME VQKRLHEQLE VQKQLQLRIE AQGKYLQMII 180 EEQQKLGGSL EGSEERKLSH SPPTLDDYPD SIQPSPKKSR LDDLSTDAVR GVAQPGFESH 240 LIGPWDQELC PKTNICDPAF QVDEFKANPG LI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G01060.1	2e-61	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG051990.12