PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG051420.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

G2-like

Protein Properties

Length: 407aa MW: 45788.2 Da PI: 7.0779

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG051420.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	107.2	9e-34	44	98	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kprl+WtpeLH+rFv+av+qLGG+ekAtPkt+++lm+++gLtl+h+kSHLQkYRl TRIDC1BG051420.5 44 KPRLKWTPELHQRFVDAVNQLGGAEKATPKTVMRLMGIPGLTLYHLKSHLQKYRL 98 79****************************************************8 PP
2	Myb_DNA-binding	68.4	1.2e-21	46	97	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r++WT+e+++++vdav+qlGg t+kt++r mg g+tl+++ks++qky+ TRIDC1BG051420.5 46 RLKWTPELHQRFVDAVNQLGGAekaTPKTVMRLMGiPGLTLYHLKSHLQKYR 97 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 407 aa Download sequence
MYHQHQGPSE LFTTRTTFPM ERHLFLHGGS TQGDSGLVLS TDAKPRLKWT PELHQRFVDA 60 VNQLGGAEKA TPKTVMRLMG IPGLTLYHLK SHLQKYRLSK NLQAQVNVGT NKNTIGCAIV 120 ADGMPGTSVP AMINTNVIPQ PEKTMQIGEA LQMQIEVQRQ LNEQLEVQRH LQLRIEAQGK 180 YLQAVLEQAQ ESLGKQNLGP ANLEDAKMKI SELVSQVSNE CFSNAVTEIK ESSSMHRLEP 240 RQIQFMESST NNCLTAAGGF INEHRLHSHG MLKAYDDSSI FCRKHSPDRE YQFSLNRSLS 300 ERKMGHLHNV NEYHKAEFGS ESDMEIQQEY TTPQKNGRGS TTSSASGSKE RDADRLYLEE 360 PNCKRQAVEH SGFEHPSSGK KLDLNTQNTD DGDHGYRHFD LNGFSWS

Sequence ? help Back to Top

Protein Sequence Length: 407 aa Download sequence

MYHQHQGPSE LFTTRTTFPM ERHLFLHGGS TQGDSGLVLS TDAKPRLKWT PELHQRFVDA  60
VNQLGGAEKA TPKTVMRLMG IPGLTLYHLK SHLQKYRLSK NLQAQVNVGT NKNTIGCAIV  120
ADGMPGTSVP AMINTNVIPQ PEKTMQIGEA LQMQIEVQRQ LNEQLEVQRH LQLRIEAQGK  180
YLQAVLEQAQ ESLGKQNLGP ANLEDAKMKI SELVSQVSNE CFSNAVTEIK ESSSMHRLEP  240
RQIQFMESST NNCLTAAGGF INEHRLHSHG MLKAYDDSSI FCRKHSPDRE YQFSLNRSLS  300
ERKMGHLHNV NEYHKAEFGS ESDMEIQQEY TTPQKNGRGS TTSSASGSKE RDADRLYLEE  360
PNCKRQAVEH SGFEHPSSGK KLDLNTQNTD DGDHGYRHFD LNGFSWS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G18240.1	3e-98	G2-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG051420.5