PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG051140.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 478aa    MW: 50550.4 Da    PI: 6.5039
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG051140.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS285.41.6e-871034692374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       + lL+ecA a+s g+l+ a+ +L +ls++asp++ +  +Rl+ayf++A+aarl++s+ ++++ ++ps++s  + s + aa+++f++v P+ + 
  TRIDC1BG051140.1 103 IALLMECAVAMSVGNLADANGTLLELSQMASPYApSCGERLVAYFARAMAARLMSSWVGVCAPVHPSSAS--SWSGVHAAFRAFHNVAPFARC 193
                       689*******************************8889***********************999888887..477777899************ PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqG..lQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       ++l++NqaIlea+ g++ vH++D+d+  G  lQW++Ll aLa+Rp+gpp lR+Tg+g     s+ +l+  g +La +A++lg+pfef +++ +
  TRIDC1BG051140.1 194 AYLACNQAILEAFRGKRLVHVVDLDVVPGgaLQWLSLLSALAARPGGPPVLRVTGFGV----SASALHDAGTQLAGLATKLGMPFEFYAVAKR 282
                       **************************988447**************************....9**************************6444 PP

              GRAS 185 rledl.eleeLrvkp.gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe...adhnsesFlerflealeyysalfdsle 272
                         + +  + +L  ++ gE++aV++    h l+d  ++       +++lv+ l+Pkvv++veqe   a  ++++Fl+rf+ al++ysa+fd+l 
  TRIDC1BG051140.1 283 PGDVVdAVADLPSRRpGEVVAVHWLR--HALYDAAGDDVV----TMRLVRWLEPKVVTLVEQErgpAGGDGGQFLDRFVAALHHYSAVFDALG 369
                       5555556889977767********98..888877777766....9******************766666889********************6 PP

              GRAS 273 aklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslv.lgW 362
                       a  p++    r+ vE+ +lgrei nv+a +g  r  r+  +++W+  l + GF     +  a+  a+ l   ++ + gy+v ++++  v lgW
  TRIDC1BG051140.1 370 AARPADGdASRHLVENGVLGREIGNVLAVAGPTRSGRE-MFGSWQVELARNGFL----RAGAVGRAQVLAGACPaGLGYTVADDHDGTVrLGW 457
                       6666665499***********************88875.5*************5....5668899999******999*****88666666*** PP

              GRAS 363 kdrpLvsvSaWr 374
                       k+ pL++vS W+
  TRIDC1BG051140.1 458 KGTPLYAVSTWT 469
                       ***********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 478 aa     Download sequence    
MHDSSLGLMQ FHDHHQYMYG SSTGPFLPQH HGFIHPGDDR CTGKVVPALV EQATAGVAEE  60
VEFDACKEGG GDVAVVGQER QQHDQDAPKP GEEEKEAQGV RMIALLMECA VAMSVGNLAD  120
ANGTLLELSQ MASPYAPSCG ERLVAYFARA MAARLMSSWV GVCAPVHPSS ASSWSGVHAA  180
FRAFHNVAPF ARCAYLACNQ AILEAFRGKR LVHVVDLDVV PGGALQWLSL LSALAARPGG  240
PPVLRVTGFG VSASALHDAG TQLAGLATKL GMPFEFYAVA KRPGDVVDAV ADLPSRRPGE  300
VVAVHWLRHA LYDAAGDDVV TMRLVRWLEP KVVTLVEQER GPAGGDGGQF LDRFVAALHH  360
YSAVFDALGA ARPADGDASR HLVENGVLGR EIGNVLAVAG PTRSGREMFG SWQVELARNG  420
FLRAGAVGRA QVLAGACPAG LGYTVADDHD GTVRLGWKGT PLYAVSTWTC CTTAHARA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.18e-87GRAS family protein