PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050930.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 270aa    MW: 30844.4 Da    PI: 8.9971
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050930.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.41.3e-18126212193
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k++++s+v++  +l lp +f+++h  ++ ++ +++lede+g +++  +   +++ +  l++GW++F   ++L++gD++vF+l + ++f+ +
  TRIDC1BG050930.1 126 FVKTMVRSHVSSCFWLGLPSSFCKDHL-PP-REHKMVLEDEEGVEFDAVY--IGNRTG--LSGGWRGFSMHHDLEDGDSLVFELAEPDRFKIY 212
                       89*********************9994.44.4459***************..555444..***********************9876777444 PP
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    
AAYEEERRKR ILDNLKHLED LGISKMAKSL IQATRQQDKT PRASPKSRKK FEATTEVRRS  60
SRARTTVSYK DDFPELDDFV RRRRVSKSVD NGRGYTGRIS SYQQQQRAFK RAEKLQDSLD  120
PDNPSFVKTM VRSHVSSCFW LGLPSSFCKD HLPPREHKMV LEDEEGVEFD AVYIGNRTGL  180
SGGWRGFSMH HDLEDGDSLV FELAEPDRFK IYISKAIEDG KEAEPNDKNA DVDSDSAQEV  240
PDQTDSPVSE PPSSPEPLKG AKRRKLRGRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1258264LKGAKRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58280.13e-43B3 family protein