PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG050010.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 450aa    MW: 49426.3 Da    PI: 8.421
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG050010.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2544.3e-17113161355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       y+GVr+++ +grWv+e+r+p   + r kr++lg+f+ta +Aa a+++a+ +++g
  TRIDC1BG050010.2 113 YRGVRQRR-WGRWVSEVREP---N-RgKRHWLGTFDTAVDAALAYDRAAVAIYG 161
                       9****998.*******9998...3.35*********************988776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 450 aa     Download sequence    
RASLGLGGEP SRRLTRFSIV PRGGGLRTPY RSFRWSLPPR VAEEGGRRRR MPVEGAVGIK  60
GEEMEQASAT TPTTSTIRTK RARPKSSATL RIKTPVASPP GGEGGPEDRD HMYRGVRQRR  120
WGRWVSEVRE PNRGKRHWLG TFDTAVDAAL AYDRAAVAIY GSRAIVNFPS AFFISTAQPV  180
QCHSPSSSPA TAASVFVEHK LRPMLAAASV LTEHGVKPMM AAASILDEHE IKPVITASVS  240
DEREVKPMVA ASVFGEREVK PMVAASVFHE REVKPMVPAS VFGEREVKPV VAASVFGERE  300
VKPMVAASVF HEREVKPMVP ASVFGEREVR PMVAASVSGE REVKPMVAAS VFGEREVKPM  360
VAASVFGEHE VKPTPVHGVG DDTWIAQHWD ASWAEREEVY ADYLKDIAMY IDVDAITEKL  420
VYHPGIYGKD YQVDGFDAEF TVSPLWELGD