PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG049260.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 384aa MW: 41741.4 Da PI: 5.1803

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG049260.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	41.8	2e-13	154	205	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ + Lr+l+P + + ++ + a+i A+e+I++L+ TRIDC1BG049260.2 154 QRMTHIAVERNRRRQMNDYLRVLRSLMPGS---YVQRGDQASIIGGAIEFIRELE 205 79**************************...9****************996 PP

Sequence ? help Back to Top
Protein Sequence Length: 384 aa Download sequence
MVDYMLGQTT PLPPGGPHGQ VSLDKLSFSD VLQFADFGPR LALNQPSADH DDARDDDEED 60 SYFFRFQSQL SGSDDPDPRG GAGIHHAAEH EGSKTADGSG GPHDHGGGVS ESTTLVQQSD 120 GGGRVGQKAG GEQAKSGRRK RPRSTKTSEE VESQRMTHIA VERNRRRQMN DYLRVLRSLM 180 PGSYVQRGDQ ASIIGGAIEF IRELEQLIQC LESQKRRRLY GDTPRPVADA SAPVVPATSI 240 HEPPPQGHEA PPFYVSPSLS FPAAGNGDGA AGAKVMIDLD TCGGGLREEV AENKSSLADI 300 EVRVLGEDAV IKVLSRRRPE QLIKTIAELE EMHMSILHTN ITTIEQTVLY SFNVKVPSEP 360 RFTAEEIVGA VHQILSFIDV NYTL

Sequence ? help Back to Top

Protein Sequence Length: 384 aa Download sequence

MVDYMLGQTT PLPPGGPHGQ VSLDKLSFSD VLQFADFGPR LALNQPSADH DDARDDDEED  60
SYFFRFQSQL SGSDDPDPRG GAGIHHAAEH EGSKTADGSG GPHDHGGGVS ESTTLVQQSD  120
GGGRVGQKAG GEQAKSGRRK RPRSTKTSEE VESQRMTHIA VERNRRRQMN DYLRVLRSLM  180
PGSYVQRGDQ ASIIGGAIEF IRELEQLIQC LESQKRRRLY GDTPRPVADA SAPVVPATSI  240
HEPPPQGHEA PPFYVSPSLS FPAAGNGDGA AGAKVMIDLD TCGGGLREEV AENKSSLADI  300
EVRVLGEDAV IKVLSRRRPE QLIKTIAELE EMHMSILHTN ITTIEQTVLY SFNVKVPSEP  360
RFTAEEIVGA VHQILSFIDV NYTL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	155	166	RMTHIAVERNRR
2	215	219	KRRRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G24140.1	1e-104	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG049260.2