PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG048940.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 117aa    MW: 12608.2 Da    PI: 5.241
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG048940.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.73e-5721113193
              NF-YB   1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyre 92 
                        vreqdrflPian+srimkk++Pan+ki+kdaketvqecvsefisf+tseasdkcqrekrktingddllwa+atlGfe+y+eplkvyl+kyre
  TRIDC1BG048940.10  21 VREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEEYIEPLKVYLQKYRE 112
                        69*****************************************************************************************9 PP

              NF-YB  93 l 93 
                        +
  TRIDC1BG048940.10 113 I 113
                        8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 117 aa     Download sequence    
GGGGGGGGSD DGGGGGGFGG VREQDRFLPI ANISRIMKKA IPANGKIAKD AKETVQECVS  60
EFISFITSEA SDKCQREKRK TINGDDLLWA MATLGFEEYI EPLKVYLQKY REIFNSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-62NF-YB family protein