PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1BG048240.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 417aa MW: 45487 Da PI: 6.321

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG048240.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	33	1.4e-10	1	26	18	45
HTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 18 qlGggtWktIartmgkgRtlkqcksrwq 45 ++G++ W+ Ia+ ++ gRt++++k++w+ TRIDC1BG048240.3 1 MHGNK-WAEIAKLLP-GRTDNSIKNHWN 26 59*.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MHGNKWAEIA KLLPGRTDNS IKNHWNSSVR KRLDEYDTGA ALPVPVHVSH NDLKQVTMAP 60 PAENYIDLNK EPNISLSSVI VDHSDPTHSP RVCSLKNIKG CSDFLSLSLP TAQPVTSCQA 120 SVADDSAVAL AIMGMKMNSG RDKDMELNFV CQKGLQINLP NEKGLEINSV TAKPDGEIDN 180 TGRESTLVKE AQSFGSLCYQ IPKLEDIDLV RSPVLSRHHG SEHGVDGFQS PTGYATPSPT 240 DGIQSDQLSV ESILKSAAEN FPGTPSILRR RKRDKPTPSQ DTDFKIDANS DGFDTPKANC 300 TTYSPHSFKT ASFLSLGRLD DQQLPSVLGK FDVSPTYRLR SKRMAVLKTV EKHLDFSADV 360 MDTCDMVGSL KSSCRNTESV NASSDISSAQ DRRINGHMIG LETLTSDFAH TTQLDAT

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MHGNKWAEIA KLLPGRTDNS IKNHWNSSVR KRLDEYDTGA ALPVPVHVSH NDLKQVTMAP  60
PAENYIDLNK EPNISLSSVI VDHSDPTHSP RVCSLKNIKG CSDFLSLSLP TAQPVTSCQA  120
SVADDSAVAL AIMGMKMNSG RDKDMELNFV CQKGLQINLP NEKGLEINSV TAKPDGEIDN  180
TGRESTLVKE AQSFGSLCYQ IPKLEDIDLV RSPVLSRHHG SEHGVDGFQS PTGYATPSPT  240
DGIQSDQLSV ESILKSAAEN FPGTPSILRR RKRDKPTPSQ DTDFKIDANS DGFDTPKANC  300
TTYSPHSFKT ASFLSLGRLD DQQLPSVLGK FDVSPTYRLR SKRMAVLKTV EKHLDFSADV  360
MDTCDMVGSL KSSCRNTESV NASSDISSAQ DRRINGHMIG LETLTSDFAH TTQLDAT

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	269	275	RRRKRDK
2	269	276	RRRKRDKP
3	270	276	RRRKRDK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G02320.2	2e-15	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG048240.3