PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG047820.6 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | bHLH | ||||||||
Protein Properties | Length: 136aa MW: 15241.3 Da PI: 10.5603 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 32.6 | 1.4e-10 | 42 | 89 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ rE+ RRdr+N++f+eL +l + + +K +K++iL A++ + +L TRIDC1BG047820.6 42 TKACREKLRRDRLNERFSELCAVLEPG---KPPKADKVAILSDATRLLDQL 89 6789**********************9...99**************99998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 136 aa Download sequence |
RRSQGVILGF DAPRREDAAA AAQDNSGAKK RSRPESSAQP GTKACREKLR RDRLNERFSE 60 LCAVLEPGKP PKADKVAILS DATRLLDQLR AEAQKLKASN ESLQDSIKSL KSEKSELRDE 120 KTKLKAERER LEQMLK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 4e-39 | bHLH family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG047820.6 |