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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
TRIDC1BG047480.9 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family |
LSD |
Protein Properties |
Length: 146aa MW: 14992.5 Da PI: 7.9177 |
Description |
LSD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
TRIDC1BG047480.9 | genome | EnsemblPlants | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-LSD1 | 44.1 | 3.3e-14 | 30 | 54 | 1 | 25 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25
C+gCr+lL+YP+GA+sV+Ca+C tV
TRIDC1BG047480.9 30 CSGCRNLLMYPAGATSVCCAVCSTV 54
***********************99 PP
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2 | zf-LSD1 | 46.8 | 4.9e-15 | 69 | 93 | 1 | 25 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25
CggC+tlL+Y rGA+sV+C++C+tV
TRIDC1BG047480.9 69 CGGCHTLLMYIRGATSVQCSCCHTV 93
************************9 PP
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3 | zf-LSD1 | 38.3 | 2.2e-12 | 107 | 131 | 1 | 25 |
zf-LSD1 1 CggCrtlLsYPrGApsVRCalCdtV 25
Cg+Cr lL+Y +GA+sV+Ca+C +V
TRIDC1BG047480.9 107 CGSCRMLLMYQYGARSVKCAVCSFV 131
**********************988 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 146 aa
Download sequence |
MPVPLAPYPT PPVPFTPPAP NAGAQSQLVC SGCRNLLMYP AGATSVCCAV CSTVTAVPAP 60 GTEMAQLVCG GCHTLLMYIR GATSVQCSCC HTVNLAMEAN QVAHVNCGSC RMLLMYQYGA 120 RSVKCAVCSF VTSVGASSGA EQKPSN
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