PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1BG046850.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

C2H2

Protein Properties

Length: 268aa MW: 29479.1 Da PI: 4.523

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG046850.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.3	0.00025	201	217	1	17
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 + C+ C+k+F+r n++ TRIDC1BG046850.2 201 FICHVCSKTFNRYNNMQ 217 89*********998876 PP

Sequence ? help Back to Top
Protein Sequence Length: 268 aa Download sequence
MVLSAYVMES AGLGVRYFEW LRLRSPRASS PSSMPSSLSS PSSDCLVPGE DHRSTMLCLP 60 LLGRVGAGEE TTSGGTSAGA QTSPIKEELS GITEDAGVDL NIGLPASGGY SSEEEVPPMA 120 MSMDEDEEDE EEVETEEEEE KPRYDGCKVQ PGVHVEHSEM LAESVEGSDH VSVAGEESSG 180 CRHRRFWIPT PAQILIGAVQ FICHVCSKTF NRYNNMQKNP ARSRMMEAGV RQVDVVAEEV 240 FKAAHGWRLE TRRIMGVRIF KFLWFPAF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G20880.1	9e-15	C2H2 family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG046850.2