PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG046850.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 272aa MW: 29623.2 Da PI: 4.3564 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00024 | 201 | 217 | 1 | 17 |
EEETTTTEEESSHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLk 17 + C+ C+k+F+r n++ TRIDC1BG046850.1 201 FICHVCSKTFNRYNNMQ 217 89*********988765 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MVLSAYVMES AGLGVRYFEW LRLRSPRASS PSSMPSSLSS PSSDCLVPGE DHRSTMLCLP 60 LLGRVGAGEE TTSGGTSAGA QTSPIKEELS GITEDAGVDL NIGLPASGGY SSEEEVPPMA 120 MSMDEDEEDE EEVETEEEEE KPRYDGCKVQ PGVHVEHSEM LAESVEGSDH VSVAGEESSG 180 CRHRRFWIPT PAQILIGAVQ FICHVCSKTF NRYNNMQVTD RCPAFCLIST KICAESKFSD 240 LSSNFLFFKR PSCVLNLKFS HMNTCTTLEL NG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G20880.1 | 5e-15 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG046850.1 |