PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG046040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 212aa    MW: 21872.8 Da    PI: 7.7211
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG046040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.93.5e-202574255
               AP2  2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
                      +y+GVr+++ +g+W+AeIrdp     +  +r++lg+f tae Aa+a+++a+++++g
  TRIDC1BG046040.1 25 RYRGVRQRP-WGKWAAEIRDP-----HkaARVWLGTFETAEAAARAYDEAALRFRG 74
                      7********.**********7.....337************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
QYPHTYAGGG GEAAAAEQAS VPERRYRGVR QRPWGKWAAE IRDPHKAARV WLGTFETAEA  60
AARAYDEAAL RFRGSRAKLN FPEDARLTAP APTASAAPTM ASSAAAYPAS AVSDYLQYQM  120
LLRAGGGGFP PYYGGGGGGG ISGSSSGSYS FPESSVTVAS VPSSASSASG YGGAAAEHGD  180
AAQWAWPAET AWTYPATTGS WSGSNQYPPP PQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G50080.11e-26ERF family protein