PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG044790.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 301aa    MW: 33016.5 Da    PI: 8.8569
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG044790.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.31.8e-50201441128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 
                       lppGfrFhPtdeelv++yL+++++g ++++  +i+evd+yk++Pw+Lp+++  +ekewyfFs+rd+ky++g+r+nr++ +gyWkatg dk+v 
  TRIDC1BG044790.1  20 LPPGFRFHPTDEELVMHYLCRRCAGLPISV-PIIAEVDLYKFDPWQLPRMALYGEKEWYFFSPRDRKYPNGSRPNRSAGTGYWKATGADKPVG 111
                       79****************************.88***************7666789*************************************9 PP

               NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                       +   +   +kk Lvfy g+apkg kt+W+mheyrl
  TRIDC1BG044790.1 112 T--PKPLAIKKALVFYAGKAPKGDKTNWIMHEYRL 144
                       9..7789**************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MSGGGGGGSA ATQGQQDLQL PPGFRFHPTD EELVMHYLCR RCAGLPISVP IIAEVDLYKF  60
DPWQLPRMAL YGEKEWYFFS PRDRKYPNGS RPNRSAGTGY WKATGADKPV GTPKPLAIKK  120
ALVFYAGKAP KGDKTNWIMH EYRLADVDRS ARKKNSLRLD DWVLCRIYNK KGASERPSAG  180
DRTASASPGH AAVGSPPEQK PALLPPYAPQ PFSDLAAYYE VRPSDSMPRA HADSSCSEHV  240
LTASCERPEV QSQPKISEWE RTFATATPGV NPAGLMLDPA AGLPAGDPLL QDILMYWGKP  300
F
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-117NAC family protein