PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG043880.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family G2-like
Protein Properties Length: 308aa    MW: 31590.2 Da    PI: 7.126
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG043880.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.71.7e-3090143155
           G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                       +prl+Wtp+LH+rFv+av++L G+++A+Pkti++lm+v+gLt+e+v+SHLQkYRl
  TRIDC1BG043880.1  90 RPRLVWTPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDGLTRENVASHLQKYRL 143
                       59*******************.********************************8 PP
2Myb_DNA-binding48.12.6e-1592142148
                       TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                       r+ WT+++++++vdav+ lG +   +ktI++ m   g+t++++ s++qky+
  TRIDC1BG043880.1  92 RLVWTPQLHKRFVDAVAHLGIKnaVPKTIMQLMSvDGLTRENVASHLQKYR 142
                       789*******************9***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MREEEEPSWF ARFDEDLPAP DELMPLSQSL ITRDLAAAFD IPTHGGGGPL SGGADGAGGQ  60
EMNGGASSAA GSSGGNGGGN GEEPARTLKR PRLVWTPQLH KRFVDAVAHL GIKNAVPKTI  120
MQLMSVDGLT RENVASHLQK YRLYLKRMQG LGNGGGGGGG SHSSGSGTDA ATEHLFATGP  180
SPFLPPGRGP AVADPYTPYA AMPAHPAAHH HHHHPQQIAH FHHPAARPLG HYGAGPGGGF  240
DHGFLSRAVA SGAPVGPPGM HHRMVGGGAA MGMMAPSSFA EELELGSRGG GGGGGRRELT  300
LFPTSGEH
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1288296RGGGGGGGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G10760.17e-50G2-like family protein