PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG041470.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | SRS | ||||||||
Protein Properties | Length: 89aa MW: 9261.06 Da PI: 4.3376 | ||||||||
Description | SRS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF702 | 49.3 | 1.8e-15 | 1 | 35 | 120 | 154 |
DUF702 120 vssvddgeeelaYqtavsigGhvfkGiLydqGlee 154 v+svddg +e+aYq+avsi+Gh+f+G+LydqG+++ TRIDC1BG041470.1 1 VTSVDDGADEFAYQAAVSINGHMFRGFLYDQGADN 35 79******************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 89 aa Download sequence |
VTSVDDGADE FAYQAAVSIN GHMFRGFLYD QGADNGRTSN DEPSHAHAAA VRSISDLHLG 60 NASAVPPDMY NTVSGALILG GMGYGNTMN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12330.1 | 1e-13 | SRS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG041470.1 |