PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038830.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 328aa    MW: 35886.8 Da    PI: 4.632
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038830.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.15e-1976126155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +g++GVr++  +g+WvAeIr+p   + r  r +lg+f tae+Aa a+++a+++++g
  TRIDC1BG038830.5  76 CGFRGVRQRT-WGKWVAEIREP---N-RvSRLWLGTFPTAEDAACAYDEAARAMYG 126
                       79*****999.**********8...2.58************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 328 aa     Download sequence    
NPKGDAQPVA SILRKKRPRR SRDGPNSVSE TIRRWKEVNQ QLEHDPQGAK RARKPPAKGS  60
KKGCMQGKGG PENTQCGFRG VRQRTWGKWV AEIREPNRVS RLWLGTFPTA EDAACAYDEA  120
ARAMYGALAR TNFPVHPAQA PAVAVAAAIE GVVRGASASC ESTTTSTNHS DVASSLPRQA  180
QALEIYSQPD VLESTESVVL TPVEHYSHQD SVPDAGSSIA RSTSEEDVFE PLEPISSLPD  240
GESDGFDIEE LLRLMEADPI EVEPVNGGSW NGVEIGQQEP LYLDGLDQGM LEGMLQSDYP  300
YPMWISEDRA MHNPAFHDAE MSEFFEGL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.13e-36ERF family protein