PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG038790.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 289aa    MW: 30224.6 Da    PI: 8.4164
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG038790.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.15.2e-18187221135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       C++C + kTp+WR gp g+ktLCnaCG+++++ +l
  TRIDC1BG038790.3 187 CTHCASEKTPQWRTGPLGPKTLCNACGVRFKSGRL 221
                       *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 289 aa     Download sequence    
DFFPAAPENG LHHHHHLGAG VGELSATTPS ATSSDHQTSM LSFADEFYIP VSSEEAAELE  60
WLSKFVDDSY SDMPNYSSAA HAAMAAANAV NNGGGSSAGQ DSCVTAVPGR GARSKRSRAS  120
AAAAAAWHSL MPRPPSQPSP SSSCSSSDFP SSTTARPSGS NCGSRGKKQG PVAGGEVGLV  180
EGGVRRCTHC ASEKTPQWRT GPLGPKTLCN ACGVRFKSGR LVPEYRPAAS PTFLLTQHSN  240
SHRKVMELRR QKELVLIRGS HRLDASAAAG PGPGVTVKPE LMFHDYGIC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45050.12e-44GATA family protein