PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG035890.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 292aa    MW: 31545.1 Da    PI: 10.4173
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG035890.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B395.34.1e-3034147199
                       EEEE-..-HHHHTT-EE--HHH.HTT............---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEE CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh............ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvv 81 
                       f+kv tpsdv+k++rlv+pk++ae++            + +  +++ l++ed+ g+ W+++++y+++s++yv+tkGW++Fvk+++L +gD+v+
  TRIDC1BG035890.1  34 FEKVVTPSDVGKLNRLVIPKQHAERYfpldgaaaalatEANGGKGMVLSFEDRAGKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVL 126
                       99***************************99999888855555899*********************************************** PP

                       EE...E-SSSEE..EEEEE-S CS
                B3  82 Fk...ldgrsefelvvkvfrk 99 
                       F     dg  +++l++ ++r+
  TRIDC1BG035890.1 127 FGrgvGDGAARGRLFIDFRRR 147
                       *95322233677777777765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
RPKAMEFSPT APAGGEESER VCASSSVVEK EHMFEKVVTP SDVGKLNRLV IPKQHAERYF  60
PLDGAAAALA TEANGGKGMV LSFEDRAGKA WRFRYSYWNS SQSYVMTKGW SRFVKEKRLG  120
AGDTVLFGRG VGDGAARGRL FIDFRRRRPA EAYSATVAFP PPATSSLSHR LPLLPSVPFC  180
PWRRDFGTTY GVPPAASGSN RHVLFLRQQV PAAVVLKSVP VHAAASVLEP PTRPMPKRVR  240
LFGVNLDSPP TEDGGACGVT QMVTSTLLLP LPSSSTSSTA GKERQCSLDL GL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1144149FRRRRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G61970.18e-50B3 family protein