PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG029010.7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | HB-other | ||||||||
Protein Properties | Length: 65aa MW: 7643.7 Da PI: 9.6108 | ||||||||
Description | HB-other family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 59.8 | 4.3e-19 | 12 | 65 | 3 | 52 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrR 52 k ++t+eq+e+Le++++++++p+ ++r++L +++ +++ rq+kvWFqNrR TRIDC1BG029010.7 12 KYVRYTPEQVEALERVYAECPKPTSTRRQQLLRECpilsNIEPRQIKVWFQNRR 65 5679*************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 65 aa Download sequence |
GGYDKGGMDS GKYVRYTPEQ VEALERVYAE CPKPTSTRRQ QLLRECPILS NIEPRQIKVW 60 FQNRR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30490.1 | 7e-36 | HD-ZIP family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG029010.7 |