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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | TRIDC1BG027920.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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| Family | FAR1 | ||||||||
| Protein Properties | Length: 359aa MW: 42268.1 Da PI: 8.6757 | ||||||||
| Description | FAR1 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | FAR1 | 69.5 | 7.9e-22 | 37 | 117 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
++Yn+YA +vGFsvrks++k++ +++i ++ vCs+eg+re++++k +trtgC+a+++ + +kdg w v+kl +eHnH la
TRIDC1BG027920.1 37 DMYNAYAAKVGFSVRKSHTKRR-GDKSISQKYIVCSNEGHRETQSSK--------DTTRTGCEARIQFTVSKDGIWTVQKLITEHNHYLA 117
58**************998776.8888**************998776........99******************************996 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 359 aa Download sequence |
QVRVEKRDPS QAIDKVGETL IVPEVGLAFD SEDSAYDMYN AYAAKVGFSV RKSHTKRRGD 60 KSISQKYIVC SNEGHRETQS SKDTTRTGCE ARIQFTVSKD GIWTVQKLIT EHNHYLASPN 120 KVHKLRSQRR VIEADRHLIG QIREAGMKPS QVYDFMVAFY GGPDKVPFSK MDCNNEIGRE 180 RKKYLESNDA QTLLEYLKNK QREDPTFFYA IQIDQVDGQI ANFFWADDRS EFYFNKKWFE 240 LLDQYNLEDN EWMKKLYELR EKWAAVYRDS FTADMNSTQR SEGMNNVFKQ RFRXXXXXXX 300 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXX |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT4G38180.1 | 5e-39 | FAR1 family protein | ||||
| Link Out ? help Back to Top | |
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| Ensembl | TRIDC1BG027920.1 |
| ©2010-2022, Center
for Bioinformatics, Peking University Last Modified: 2022-12-08 Questions or Comments, please contact  |
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