PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC1BG025500.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

E2F/DP

Protein Properties

Length: 375aa MW: 40035.9 Da PI: 9.0347

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1BG025500.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	84.6	8e-27	120	206	3	71
E2F_TDP 3 eksLrlltqkflklleksee.givtlnevakeLvse.....................dvknkrRRiYDilNVLealnliekkekneirwkg 71 +++Lr++++k ++ek+e g++t+neva+eLv+e d+kn+rRR+YD+lNVL+a+++i+k +k+ei+wkg TRIDC1BG025500.1 120 NRGLRQFSMK---VCEKVEGkGRTTYNEVADELVAEfadpnsnigspdpdnpntqqyDEKNIRRRVYDALNVLMAMDIISK-DKKEIQWKG 206 689*****...*999********************************************************.*****98 PP

Sequence ? help Back to Top
Protein Sequence Length: 375 aa Download sequence
SIFRFVPRVF SPSSSQFCAP ARAIPTAMVS SARSSGGMAH SASNSAGSAG SPSGGIGPGK 60 GVAAAAATTS ASASTPASGS TVARRLNDLE IQGDDAPSSQ PAASKKKKKG TRVVGPDKGN 120 RGLRQFSMKV CEKVEGKGRT TYNEVADELV AEFADPNSNI GSPDPDNPNT QQYDEKNIRR 180 RVYDALNVLM AMDIISKDKK EIQWKGLPRT SLSDIDKLKT EVIGLKGRID KKSAYLQELQ 240 DQYVGLQNLV ERNEQLYGSG DAPSGGVALP FILVQTRPHA TVEVEISEDM QLVHFDFNST 300 PFELHDDSFV LKAMGFSGKE ETDGTVALVA NAVECSSASN VYGHRSPQPA RPNGIRLRTS 360 PPIPGILKGR VKHEH

Sequence ? help Back to Top

Protein Sequence Length: 375 aa Download sequence

SIFRFVPRVF SPSSSQFCAP ARAIPTAMVS SARSSGGMAH SASNSAGSAG SPSGGIGPGK  60
GVAAAAATTS ASASTPASGS TVARRLNDLE IQGDDAPSSQ PAASKKKKKG TRVVGPDKGN  120
RGLRQFSMKV CEKVEGKGRT TYNEVADELV AEFADPNSNI GSPDPDNPNT QQYDEKNIRR  180
RVYDALNVLM AMDIISKDKK EIQWKGLPRT SLSDIDKLKT EVIGLKGRID KKSAYLQELQ  240
DQYVGLQNLV ERNEQLYGSG DAPSGGVALP FILVQTRPHA TVEVEISEDM QLVHFDFNST  300
PFELHDDSFV LKAMGFSGKE ETDGTVALVA NAVECSSASN VYGHRSPQPA RPNGIRLRTS  360
PPIPGILKGR VKHEH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G03415.1	1e-126	E2F/DP family protein

Link Out ? help Back to Top
Ensembl	TRIDC1BG025500.1