PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG017860.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB_related
Protein Properties Length: 302aa    MW: 33528.4 Da    PI: 7.0488
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG017860.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.53.1e-132567145
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
                      r+ WT  Ed +l+++++ +G++ W+ Iar +  gR ++ +k++++
  TRIDC1BG017860.2 25 RKIWTDSEDMKLIELHQTWGNR-WSVIARLLS-GRPENAVKNHYH 67
                      567*******************.*********.***********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 302 aa     Download sequence    
MYLPGRSGKQ CRERWVNQLD PNIERKIWTD SEDMKLIELH QTWGNRWSVI ARLLSGRPEN  60
AVKNHYHATK RSLNAKRQLK KRNNKQPPPG QLSLLAEYIH SLEPHTGSPM ETPPVSPLLY  120
HDQEHGGQMG MAGRDVAVVI TPTTQAHPTY PNSAMTGMYY HPNPANMQYW APDLNVADRQ  180
NEGYSYYIPP SAHLNHHLCY GLSPTQMVSE QDMQQAAKAS MNMSAFTGQH TLPASNLKAV  240
AEMHRESSSN NQLGNVSGGA SDWSYYYGMD EVGPSGPAGG TGSGSNPDDI DVVQMAPREF  300
SA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18770.14e-27MYB family protein