PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG013330.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 557aa    MW: 61826.6 Da    PI: 5.4613
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG013330.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.13.3e-18208298199
                       EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 
                       f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l++ ++f  +
  TRIDC1BG013330.4 208 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGHRFDTNYLARKQG----LSGGWNRFATRHHLKVGDAVVFQLVEPTRF--K 292
                       88999999******************6..34789****************555555....9**********************9876666..8 PP

                       EEEE-S CS
                B3  94 vkvfrk 99 
                       v ++r+
  TRIDC1BG013330.4 293 VYILRE 298
                       888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 557 aa     Download sequence    
MAIDEPTKSK RGTPAGDPHS AKSKMGQKMV HRRRPLLDEG SSSRNEDAGD DDDFEPMAMG  60
GTPAGDSPHS ARTKMGQKMS LAHRRLSLLD DGSSISRHIA AAAAAADDDG GGSEQMGEEF  120
AVDVAQKNTT VDDSDDPDGS EDDFVPLIFQ RKKPGRSAGP VYAKRKIEKK PRLVGSNNIS  180
KISDDDGQKK YARALEVEKK LPAEGPSFVK LMQISHVVRV FWLGVPVSFC REHLPNHDVT  240
IVLEDEDGHR FDTNYLARKQ GLSGGWNRFA TRHHLKVGDA VVFQLVEPTR FKVYILRETK  300
FTTTDGALSL LSLDTSMENN MPEQGEDTSD EDVKSKEDPE ATKVITNKAS DDDSNDLFSE  360
EAANGGIRSP DPDPDFDAVK TFRTFKMVMD SSVIDRKLVP DRLLWTYYKL CGDRKAFLHR  420
RLPKHINLTL AAGVIAETAS IAEGIRSYPT SCSSSEELAA WKKTLESFEL LGMDVGFIRK  480
RLDELLFLLD ARSSDDHPPE GYEEVKLERA RAAEKMRALE SKMASLKDAL KDMDMEMEEI  540
AEKRRGHAML QLAAAPW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-32B3 family protein