PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG013330.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family B3
Protein Properties Length: 533aa    MW: 59334.7 Da    PI: 5.1962
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG013330.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B357.23.1e-18184274199
                        EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE.. CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefel 92 
                        f+k +  s+v +  +l +p +f++eh   ++ ++t++lede+g +++ ++  rk++    l++GW++F+  ++Lk+gD vvF+l++ ++f  
  TRIDC1BG013330.10 184 FVKLMQISHVVRVFWLGVPVSFCREHL--PNHDVTIVLEDEDGHRFDTNYLARKQG----LSGGWNRFATRHHLKVGDAVVFQLVEPTRF-- 267
                        88999999******************6..34789****************555555....9**********************9876666.. PP

                        EEEEE-S CS
                 B3  93 vvkvfrk 99 
                        +v ++r+
  TRIDC1BG013330.10 268 KVYILRE 274
                        8888875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 533 aa     Download sequence    
MGQKMVHRRR PLLDEGSSSR NEDAGDDDDF EPMAMGGTPA GDSPHSARTK MGQKMSLAHR  60
RLSLLDDGSS ISRHIAAAAA AADDDGGGSE QMGEEFAVDV AQKNTTVDDS DDPDGSEDDF  120
VPLIFQRKKP GRSAGPVYAK RKIEKKPRLV GSNNISKISD DDGQKKYARA LEVEKKLPAE  180
GPSFVKLMQI SHVVRVFWLG VPVSFCREHL PNHDVTIVLE DEDGHRFDTN YLARKQGLSG  240
GWNRFATRHH LKVGDAVVFQ LVEPTRFKVY ILRETKFTTT DGALSLLSLD TSMENNMPEQ  300
GEDTSDEDVK SKEDPEATKV ITNKASDDDS NDLFSEEAAN GGIRSPDPDP DFDAVKTFRT  360
FKMVMDSSVI DRKLVPDRLL WTYYKLCGDR KAFLHRRLPK HINLTLAAGV IAETASIAEG  420
IRSYPTSCSS SEELAAWKKT LESFELLGMD VGFIRKRLDE LLFLLDARSS DDHPPEGYEE  480
VKLERARAAE KMRALESKMA SLKDALKDMD MEMEEIAEKR RGHAMLQLAA APW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.12e-32B3 family protein