PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG010870.27 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 87aa MW: 9668.02 Da PI: 11.1047 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 36.1 | 9.1e-12 | 5 | 46 | 1 | 35 |
GATA 1 CsnCgttk.......TplWRrgp.dgnktLCnaCGlyyrkkgl 35 Cs+C++ TplWR+g d++ LCnaCG ++r kg+ TRIDC1BG010870.27 5 CSSCHARVtvwsrpgTPLWRNGTpDKPV-LCNACGSRWRIKGT 46 999999877788899*******945555.**********9997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 87 aa Download sequence |
RARRCSSCHA RVTVWSRPGT PLWRNGTPDK PVLCNACGSR WRIKGTLVNY TPAHRREDTD 60 AGEAGPDKLK LNGQKQPKKR PNCTTAA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.2 | 2e-21 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG010870.27 |