PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG006470.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | C2H2 | ||||||||
Protein Properties | Length: 169aa MW: 18267.3 Da PI: 8.0233 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00034 | 44 | 66 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C+++F++ L H +H TRIDC1BG006470.2 44 FVCKTCDRVFPSFQALGGHRASH 66 89**********99999998887 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 169 aa Download sequence |
AMTKRFAFEE KEMARMLLVV SREQLMPMPM PVAARGDRAP ERVFVCKTCD RVFPSFQALG 60 GHRASHKKPR LDDGGDLKPK LHGCSVCGLE FSIGQALGGH MRRHRAMAAG GGRVVIAMMP 120 PAAAIEKHGG GDGAVVSMKR GLCLDLNHPP CDEYGASCEG DDECEIHIL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28710.1 | 7e-22 | C2H2 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG006470.2 |