PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG005490.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 318aa    MW: 35780.6 Da    PI: 8.5847
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG005490.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.19.3e-16122201190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e+GF vr +ks+ + +  +  +++ vC + gk+ +e+++         ++r+gC+a++++ +++d+ w++++ +  HnH+l+
  TRIDC1BG005490.5 122 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 201
                       6*****************9999554.478899*******99886555.........99******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 318 aa     Download sequence    
TARCPPMASS SMDRVCAPPA AWNSCAYPVE SQDSMSVPTM AFGTGGDAQL VGDAARAEVC  60
SEATSGWTRR VRIGKAPEER EMNPNRKSAL ELSLRAYADK KDGPVLCPSI GTSFDSIDEA  120
YEFYNLYSWE CGFGVRLAKS RLNVERKRCM QEIVCACAGK PIRENSRSSR CGCNAMIRLL  180
RSNDKGWYIA EHKDAHNHPL SLTCGQKLHW KSHRHIDRYT KDLVKQLRDN NVGLGKVFSI  240
VGSYFGSVDN VPFTKRSLKT LCRKLNREQS DMDAVKTMEI LSEMKANDPD FNYTVQVDEE  300
SRVKTLMWVT SKGFDQYR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.12e-16FAR1 family protein