PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG005490.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 316aa    MW: 35543.3 Da    PI: 8.24
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG005490.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR150.19.2e-16118197190
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                       +fYn Y+ e+GF vr +ks+ + +  +  +++ vC + gk+ +e+++         ++r+gC+a++++ +++d+ w++++ +  HnH+l+
  TRIDC1BG005490.1 118 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 197
                       6*****************9999554.478899*******99886555.........99******************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MSTNGVELDG VCAPPAAWNS CAYPVESQDS MSVPTMAFGT GGDAQLVGDA ARAEVCSEAT  60
SGWTRRVRIG KAPEEREMNP NRKSALELSL RAYADKKDGP VLCPSIGTSF DSIDEAYEFY  120
NLYSWECGFG VRLAKSRLNV ERKRCMQEIV CACAGKPIRE NSRSSRCGCN AMIRLLRSND  180
KGWYIAEHKD AHNHPLSLTC GQKLHWKSHR HIDRYTKDLV KQLRDNNVGL GKVFSIVGSY  240
FGSVDNVPFT KRSLKTLCRK LNREQSDMDA VKTMEILSEM KANDPDFNYT VQVDEESRVK  300
TLMWVTSKGF DQYRCF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10240.12e-17FAR1 family protein