PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC1BG005390.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 189aa MW: 21895.9 Da PI: 8.4893 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 30.2 | 1.5e-09 | 17 | 58 | 49 | 90 |
FAR1 49 ekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 + er+++ +tr+gC a++++ +++d+ w++++ + HnH+l+ TRIDC1BG005390.3 17 KPERENTRSTRCGCAARIRLLRSDDNGWYISEHRPLHNHSLS 58 35778889********************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 189 aa Download sequence |
MERVKCMQEI VCGCAGKPER ENTRSTRCGC AARIRLLRSD DNGWYISEHR PLHNHSLSST 60 CGEKMHWPSH RLIDRYTKDL IRQLRENNIS LGKVFGIVGS FFGSVDNVPF TKRSLKTLCC 120 KLNKEQSDSD ARKTMDIFAE MKANDPEFNY TVQVDDESRM KTLVWVNGRS VEQYRCFGDV 180 VTFDTTYRH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G38180.1 | 3e-18 | FAR1 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC1BG005390.3 |