PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG004120.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 721aa    MW: 82154.4 Da    PI: 8.2806
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG004120.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS371.61e-1133467171374
              GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                       l++lL++cAeav+++++ la+ lL++++ ++s dgd +qRla+y++ +L+arla+ + ++y+ l  ++ts   +++ l a++lf e++P+ ++
  TRIDC1BG004120.1 346 LRTLLIHCAEAVAKDNHMLANDLLKKIRRHSSADGDCTQRLAFYLVDGLEARLAGIGGQVYRNLVERRTS---TIDWLEAYNLFLEACPFKRV 435
                       6789************************************************************999999...9******************* PP

              GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvak 184
                       s+  aNq+Il+  +++ rvHi+Df+is G+QWp+++q +a R+eg+p+lRiTg+++p++g  s e++e tg+rLa++A+ ++vpf+++ ++++
  TRIDC1BG004120.1 436 SYNFANQTILDVSQRQPRVHIVDFGISFGFQWPSMIQRFAWREEGAPKLRITGIEAPQPGfrSCEMIEDTGKRLADYANMFKVPFQYQGIATS 528
                       *************************************************************99***************************999 PP

              GRAS 185 rledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpr 277
                       r+e++++e+L+++++E+l+Vn+++++++l +e+ s++s+rdevLk++++++Pkv++    +  h+s+ F +rf e + +ys++fd+l+a++pr
  TRIDC1BG004120.1 529 RWETIKIEDLNIDEDEVLIVNCIFRMKNLGHETESINSARDEVLKIMRRMNPKVFISGTMNGLHSSPFFIQRFKEVMLHYSSMFDMLDANVPR 621
                       ********************************************************************************************* PP

              GRAS 278 eseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsv 370
                       ++e+r ++Er ++gr++ n++ace  e r r e++++W++r+ +aGF+++p+++ + k+  ++ +  + +++   e++g+l++gWk+r L+++
  TRIDC1BG004120.1 622 DNEAREMIERIIFGRDALNIIACEDGE-RTRPESYRQWQARFLKAGFQQLPVDQAVLKKTVHMKNSLYHKEFFAAEDRGWLLQGWKGRVLYAI 713
                       **************************9.789***************************9999999999899********************** PP

              GRAS 371 SaWr 374
                       S W+
  TRIDC1BG004120.1 714 SKWK 717
                       ***8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 721 aa     Download sequence    
MATEPLHDNL DNVAATDKSD SSSQQQLTVY NYDLSGPKSK VLSPANQEST YLLGGVTDPG  60
LCSNKSSLGQ NQFQISPGGS PEHHQIRSND ALHYISQMLM EDVDERVNIC QGEAALQDAE  120
KPFRDILGEV CTLATNWPPL HTNNKPDDSD KSGTSRYKRL WSTSFSNDYS SYNVLQPLAT  180
PLSPYIYNRN LFLPNQPLTS VGWTSGSGFP ALHCQRGVEE EKMFAASIVK LVIYLKNDIL  240
YISQLTTKAK VGEMSGNAIF EVADQRGWDT FQGRSKKHHA ITTCAIIRNE NFDRVLLCYG  300
QKSLDGITRL RESMAGEGNK NSLKSRSKGR QKLWVRKHPR KELVDLRTLL IHCAEAVAKD  360
NHMLANDLLK KIRRHSSADG DCTQRLAFYL VDGLEARLAG IGGQVYRNLV ERRTSTIDWL  420
EAYNLFLEAC PFKRVSYNFA NQTILDVSQR QPRVHIVDFG ISFGFQWPSM IQRFAWREEG  480
APKLRITGIE APQPGFRSCE MIEDTGKRLA DYANMFKVPF QYQGIATSRW ETIKIEDLNI  540
DEDEVLIVNC IFRMKNLGHE TESINSARDE VLKIMRRMNP KVFISGTMNG LHSSPFFIQR  600
FKEVMLHYSS MFDMLDANVP RDNEAREMIE RIIFGRDALN IIACEDGERT RPESYRQWQA  660
RFLKAGFQQL PVDQAVLKKT VHMKNSLYHK EFFAAEDRGW LLQGWKGRVL YAISKWKPDG  720
Q
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G37650.11e-143GRAS family protein