PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG004000.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 168aa MW: 19338.3 Da PI: 10.7135 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 124.9 | 9.3e-39 | 43 | 168 | 1 | 129 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 l++lL++cAeav+++++ la+ lL++++ ++s +gd +qRla+y++ +L+arla+ +s++y+ l ++ts +++ l a++lf e++P+ ++ TRIDC1BG004000.1 43 LRTLLIHCAEAVAKDNHLLANDLLKKIRRHSSTNGDCTQRLAFYLVDGLEARLAGIGSQVYRNLMERRTS---TTDWLEAYNLFLEACPFKRV 132 6789***********************************************************9999998...8999**************** PP GRAS 94 shltaNqaIleavegeervHiiDfdisqGlQWpaLl 129 s+ aNq+Il+ +++ rvHi+D++is G+QWp+++ TRIDC1BG004000.1 133 SYNFANQTILDVSQRQPRVHIVDLGISFGFQWPSMI 168 *********************************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
LDGIARLRER MAGEGNKNSL KIRSKGRQKL RVRKQPRKEL VDLRTLLIHC AEAVAKDNHL 60 LANDLLKKIR RHSSTNGDCT QRLAFYLVDG LEARLAGIGS QVYRNLMERR TSTTDWLEAY 120 NLFLEACPFK RVSYNFANQT ILDVSQRQPR VHIVDLGISF GFQWPSMI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G37650.1 | 2e-43 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG004000.1 |