PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1BG003080.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 321aa    MW: 35610 Da    PI: 4.7509
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1BG003080.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding569.2e-181561248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      grWT+eEd++l ++++q+G g+W++ ++  g+ R++k+c++rw++yl
  TRIDC1BG003080.1 15 GRWTAEEDDILTKYIAQHGEGSWRSLPKNAGLLRCGKSCRLRWLNYL 61
                      8******************************99************97 PP
2Myb_DNA-binding51.32.8e-1667111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg++++eEd l+v++++ lG++ W+ Ia++ + gRt++++k++w+ +
  TRIDC1BG003080.1  67 RGNFSKEEDNLIVKLHATLGSR-WSVIASYPP-GRTDNEIKNYWNAH 111
                       89********************.*********.***********976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MGRAPCCEKV GLKQGRWTAE EDDILTKYIA QHGEGSWRSL PKNAGLLRCG KSCRLRWLNY  60
LSDGVKRGNF SKEEDNLIVK LHATLGSRWS VIASYPPGRT DNEIKNYWNA HLSRQIYNFR  120
HVYAAFSGTT VTIDVNKLST TTKSRGGKAP RSSTKMQPMP EPTKSKEGSS PVDTISTTSS  180
QADLDRDKQP INNMTCGVLC SEEAMVMDPV DQNGMVLLMG TNFSDDLVNQ VGVFEEESEM  240
EALLSCIDDD MAASVLTGIE QGCHSPRVED LLDMEWEGFA SHLWDQPSQS DLLKIAEPQA  300
MTGSESDELK SFVNWLLSDN A
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49330.14e-66MYB family protein