PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC1BG001700.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 261aa MW: 29665.6 Da PI: 7.8029 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 34.2 | 8.1e-11 | 25 | 104 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 ++Yn Y+ e+GF vr ks+ + + + +++ vC ++g +++++++ r+ C a +++ ++kd+ w ++++ Hn +l+ TRIDC1BG001700.1 25 DYYNLYSWEIGFGVRYGKSRLNVERT-KCMQEIVCGCSGIPKKSNTR---------ACRCRCPALIRLLRSKDNGWDISEFIPSHNPSLM 104 69****************99995544.67899********9987655.........89****************************8775 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 261 aa Download sequence |
AEKKTDTVIV PAVGSTFDSL GEAYDYYNLY SWEIGFGVRY GKSRLNVERT KCMQEIVCGC 60 SGIPKKSNTR ACRCRCPALI RLLRSKDNGW DISEFIPSHN PSLMEKFGEK VYWPSHRHID 120 IYTHDVVKQL RENNNGIGKV YNIIDSFFGS MFNVPFTKRA LRGLCGKISR EQEGDDVGKT 180 MDAFVELGAK DTGLYRVRPD EDSRIHNLLW STGSSRAQYH FFGDAITFET TYSTDFYDMP 240 FGLFVGVNNH FHTVIFGGVL V |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G28530.1 | 1e-23 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC1BG001700.1 |