PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC1AG065380.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C2H2
Protein Properties Length: 351aa    MW: 37501.8 Da    PI: 4.5232
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC1AG065380.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H213.30.00025327348323
                       ETTTTEEESSHHHHHHHHHH.T CS
           zf-C2H2   3 CpdCgksFsrksnLkrHirt.H 23 
                       C+ C+k+F++   L +H +  H
  TRIDC1AG065380.2 327 CKSCSKTFNSEGALASHSKAkH 348
                       *****************88766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
GRRVRALGLL KGSAPNPQSI PQSNPSPPSV GLNPRPPPPV DMEFWGLEVK PNQSLKVSPD  60
DDHFLHLSQG ALGEVKKDDK ATMFVKIGDQ KLAIGTLSTD KFPQIQFDLV FEKEFELSHN  120
SKTSSVFFSG YKVFQPADGD EMDFDSEDES EEEQDTIIPA LTKENGKPGA KEQKKQVKID  180
TAAPSKSKPA AKDGGKSNKD DDSDDDDDSD EDDSQDDSGD DGALIPMEDD SDDSEDGDDS  240
SDDSEDSSDE EEEETPKKQE TGKKRAAGSV LKTPVTDKKA KIATPSGQKT GDKKGAVHVA  300
TPHPAKKAGK TPATSDKSPK SGGSVACKSC SKTFNSEGAL ASHSKAKHEA K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G44750.25e-27C2H2 family protein