PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC1AG061860.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 662aa MW: 74691 Da PI: 8.7997

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC1AG061860.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.5	6.5e-08	477	516	3	39
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkq 39 W +eE ell +a++++++g +W+ I++ +g+gR++ + TRIDC1AG061860.2 477 EWGKEEVELLRKAIHKYPKGtnkRWEVISEFIGTGRSADE 516 7***********************************9976 PP
2	Myb_DNA-binding	22	3.9e-07	605	648	2	43
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksr 43 ++W++ + lv+a k ++++ +W+++a+ ++ g+t qck + TRIDC1AG061860.2 605 DAWSEAQVLALVQALKAFPKDanqRWERVAAAVP-GKTVVQCKKK 648 58******************************.******86 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MGSKRTCLLI TYSPEIVDGV PLYVSSNCLP VKASKYEPAG HSFHAVALKL RGLDEKEDTE 60 TDDRSVSSDD KSQDFSAGSD NFSSKGKKKS GSGSQQQDHY ALLGLGNLRF LATEDQIRKS 120 YRDMALKHHP DKQAALLLHE TTEAAKQAKK DEIESHFKAI QEAYEVLMDP TKRRIFDSTD 180 EFDDDIPTDC APQDFFKVFG PAFMRNGRWS VTQPIPSLGD DATPVVDVDQ FYNFWYNFKS 240 WREFPHEDEY DLEQAESREH KRWMERQNAK IQEKAKKVEY TRVRNLVDNA YRKDPRIQRR 300 KEQEKAEKQR RKEAKYMAKK LQEEEAARAA EEERKRKEEE AKIAAAAADI RKKLKEKEKK 360 LLRKEKNRLR ALVGQVVGES HFSLSKEDVE TVCTSHDFEQ LKKLCDIMED KDTAEKARLL 420 RGALSKEENS SNTSKEEKIH ANGVADSTPK STVPQGTPKS TAPQVITLGN YEKKEKEWGK 480 EEVELLRKAI HKYPKGTNKR WEVISEFIGT GRSADEILKA TKTILLQKPD SAKAFDSFLE 540 KRKAAPSIVS PLSTRDETAG GSTVGTGTEP SKAAEQPAAS SSQTAKEKIG DDPVLEEAPS 600 ATDPDAWSEA QVLALVQALK AFPKDANQRW ERVAAAVPGK TVVQCKKKVA SMRTNFRTKK 660 AE

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MGSKRTCLLI TYSPEIVDGV PLYVSSNCLP VKASKYEPAG HSFHAVALKL RGLDEKEDTE  60
TDDRSVSSDD KSQDFSAGSD NFSSKGKKKS GSGSQQQDHY ALLGLGNLRF LATEDQIRKS  120
YRDMALKHHP DKQAALLLHE TTEAAKQAKK DEIESHFKAI QEAYEVLMDP TKRRIFDSTD  180
EFDDDIPTDC APQDFFKVFG PAFMRNGRWS VTQPIPSLGD DATPVVDVDQ FYNFWYNFKS  240
WREFPHEDEY DLEQAESREH KRWMERQNAK IQEKAKKVEY TRVRNLVDNA YRKDPRIQRR  300
KEQEKAEKQR RKEAKYMAKK LQEEEAARAA EEERKRKEEE AKIAAAAADI RKKLKEKEKK  360
LLRKEKNRLR ALVGQVVGES HFSLSKEDVE TVCTSHDFEQ LKKLCDIMED KDTAEKARLL  420
RGALSKEENS SNTSKEEKIH ANGVADSTPK STVPQGTPKS TAPQVITLGN YEKKEKEWGK  480
EEVELLRKAI HKYPKGTNKR WEVISEFIGT GRSADEILKA TKTILLQKPD SAKAFDSFLE  540
KRKAAPSIVS PLSTRDETAG GSTVGTGTEP SKAAEQPAAS SSQTAKEKIG DDPVLEEAPS  600
ATDPDAWSEA QVLALVQALK AFPKDANQRW ERVAAAVPGK TVVQCKKKVA SMRTNFRTKK  660
AE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	334	355	RKRKEEEAKIAAAAADIRKKLK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G06110.1	0.0	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC1AG061860.2